SNP Profiles of PNG 340 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	CC	AG	AC	AA	AG	AG	CC	AA	GG	GG	AA	AA	CC
1._MITC-000610	CC	CC	AG	AC	AA	AG	AG	CC	AA	GG	GG	AA	AA	CC
2._MITC-000657	CC	CC	AG	AC	AA	AG	AG	CC	AA	GG	GG	AA	AA	CC
3._RUQ_1304	_	_	_	_	_	_	AG	_	_	_	_	_	_	_
4._RUQ_1304	_	_	_	_	_	CT	_	GG	_	_	GG	_	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AA	AG	AA	GG	AA	GG	AA	AA	GG	AG	CC	GG	GG
1._MITC-000610	AG	AA	AG	AA	GG	AA	GG	AA	AA	GG	AG	CC	GG	GG
2._MITC-000657	AG	AA	AG	AA	GG	AA	GG	AA	AA	GG	AG	CC	GG	GG
3._RUQ_1304	_	GT	_	_	_	_	_	AA	_	CC	_	_	_	_
4._RUQ_1304	_	GT	_	TT	_	_	CC	AA	TT	CC	AG	GG	CC	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	GG	AA	CC	AG	GG	AG	GG	CC	TT	TT	AG	AG	AA
1._MITC-000610	AA	GG	AA	CC	AG	GG	AG	GG	CC	TT	TT	AG	AG	AA
2._MITC-000657	AA	GG	AA	CC	AG	GG	AG	GG	CC	TT	TT	AG	AG	AA
3._RUQ_1304	_	_	_	_	AG	_	_	_	_	_	_	AG	_	_
4._RUQ_1304	_	GG	AA	GG	AG	_	CT	_	_	_	_	AG	AG	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	AG	AG	GG	GG	AA	GG	AG	AC	CC	GG	AA	GG	CG	CC
1._MITC-000610	AG	AG	GG	GG	AA	GG	AG	AC	CC	GG	AA	GG	CG	CC
2._MITC-000657	AG	AG	GG	GG	AA	GG	AG	AC	CC	GG	AA	GG	CG	CC
3._RUQ_1304	_	_	_	_	_	_	_	_	AC	_	_	_	CG	CC
4._RUQ_1304	_	_	_	_	_	CC	_	_	CC	_	TT	_	GG	CC

	57	58	59	60	61	62	63	64	65	66	67	68	69	70
_Input profile	GG	GG	AG	AG	AG	CC	GG	AA	AA	CC	AA	CC	CC	GG
1._MITC-000610	GG	GG	AG	AG	AG	CC	GG	AA	AA	CC	AA	CC	CC	GG
2._MITC-000657	GG	GG	AG	AG	AG	CC	GG	AA	AA	CC	AA	CC	CC	GG
3._RUQ_1304	_	CC	_	_	_	GG	GG	_	_	_	_	CC	TT	_
4._RUQ_1304	_	CC	CT	_	_	GG	GG	TT	_	_	TT	CC	_	_

	71	72	73	74	75	76	77	78	79	80	81
_Input profile	GG	GG	GG	GG	CC	AA	GG	AG	AA	AG	AG	X_X	X_X	X_X
1._MITC-000610	GG	GG	GG	GG	CC	AA	GG	AG	AA	AG	AG	X_X	X_X	X_X
2._MITC-000657	GG	GG	GG	GG	CC	AA	GG	AG	AA	AG	AG	X_X	X_X	X_X
3._RUQ_1304	CC	_	_	GG	_	_	_	_	_	_	AG	X_X	X_X	X_X
4._RUQ_1304	CC	CC	_	-	CC	_	_	_	_	_	AG	X_X	X_X	X_X

Input profile: PNG_340 RUQ_1304

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

1._PNG_340 MITC-000610

identical
81 shared markers

View View all Clone Any

USDA-SHRS, United States of America

Mars, 2018

2._PNG_340 MITC-000657

identical
81 shared markers

View View all Clone Any

USDA-SHRS, United States of America

Mars, 2018

3._PNG_340 RUQ_1304

61.8 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

4._PNG_340 RUQ_1304

43.1 %
36 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

1	Tcm001s00947643	2	Tcm003s01336581	3	Tcm003s07402719	4	Tcm006s26664133	5	TcSNP1034
6	TcSNP1060	7	TcSNP1062	8	TcSNP1063	9	TcSNP1075	10	TcSNP1096
11	TcSNP1111	12	TcSNP1149	13	TcSNP1156	14	TcSNP1175	15	TcSNP122
16	TcSNP1253	17	TcSNP1270	18	TcSNP1309	19	TcSNP1383	20	TcSNP1414
21	TcSNP1439	22	TcSNP144	23	TcSNP1442	24	TcSNP1458	25	TcSNP1484
26	TcSNP150	27	TcSNP151	28	TcSNP1520	29	TcSNP154	30	TcSNP174
31	TcSNP193	32	TcSNP226	33	TcSNP230	34	TcSNP240	35	TcSNP242
36	TcSNP25	37	TcSNP28	38	TcSNP316	39	TcSNP32	40	TcSNP329
41	TcSNP364	42	TcSNP372	43	TcSNP413	44	TcSNP418	45	TcSNP42
46	TcSNP429	47	TcSNP430	48	TcSNP448	49	TcSNP497	50	TcSNP521
51	TcSNP529	52	TcSNP547	53	TcSNP560	54	TcSNP561	55	TcSNP577
56	TcSNP591	57	TcSNP60	58	TcSNP602	59	TcSNP619	60	TcSNP653
61	TcSNP689	62	TcSNP723	63	TcSNP731	64	TcSNP75	65	TcSNP751
66	TcSNP776	67	TcSNP799	68	TcSNP823	69	TcSNP836	70	TcSNP860
71	TcSNP872	72	TcSNP891	73	TcSNP894	74	TcSNP899	75	TcSNP90
76	TcSNP917	77	TcSNP929	78	TcSNP944	79	TcSNP953	80	TcSNP994
81	TcSNP998

SNP Profiles of PNG 340 View Data

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Input profile: PNG_340 RUQ_1304

1._PNG_340 MITC-000610

identical 81 shared markers

2._PNG_340 MITC-000657

identical 81 shared markers

3._PNG_340 RUQ_1304

61.8 % 17 shared markers

4._PNG_340 RUQ_1304

43.1 % 36 shared markers

identical
81 shared markers

identical
81 shared markers

61.8 %
17 shared markers

43.1 %
36 shared markers